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Tax Penalties Guide

Comprehensive guide to Kenya's tax penalties. Understand violations, calculate penalties, and ensure compliance to avoid costly mistakes.

Tax penalties can be severe. Stay informed and compliant to protect your business.

Understanding Tax Penalties

Key principles and penalty structures in Kenya

Kenya Revenue Authority (KRA) imposes penalties to ensure tax compliance and deter violations. Penalties vary based on the type of tax, severity of violation, and whether it's a first-time or repeat offense. Understanding these penalties helps you maintain compliance and avoid unnecessary costs.

Late Filing Penalties

Range from 5% to 25% of tax due, with minimum amounts specified for different tax types.

Interest on Overdue Tax

2% per month (24% annually) charged on unpaid tax from due date until full payment.

Administrative Penalties

Fixed amounts for specific violations like failure to register, maintain records, or comply with procedures.

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Penalties by Tax Type

Comprehensive penalty structures for all tax types

Late Filing of P9A Returns

Monthly Returns

25% or KSh 10,000

Penalty for filing P9A returns after the 9th of the following month. The penalty is 25% of the tax due or KSh 10,000, whichever is higher.

Additional Information:
  • Interest at 2% per month on unpaid tax
  • Penalty applies even if no tax is due
  • Nil returns must still be filed on time
  • Repeat offenses may result in business closure

Late Payment of PAYE

Tax Payment

2% per month

Interest charged at 2% per month (or part thereof) on unpaid PAYE from the due date until full payment.

Calculation Example:
  • Tax due: KSh 100,000
  • Late by 2 months: 2% × 2 = 4%
  • Interest: KSh 100,000 × 4% = KSh 4,000
  • Total payable: KSh 104,000

Failure to Issue P9 Forms

Annual Requirement

KSh 20,000

Penalty for failing to issue P9 forms to employees by 31st January of the following year.

Requirements:
  • P9 forms must be issued by 31st January
  • Forms must contain accurate information
  • Electronic copies acceptable if properly transmitted
  • Penalty applies per employee not issued

Late Filing of VAT Returns

Monthly Returns

5% or KSh 10,000

Penalty for filing VAT returns after the 20th of the following month. The penalty is 5% of the tax due or KSh 10,000, whichever is higher.

Key Points:
  • Due date: 20th of following month
  • Minimum penalty: KSh 10,000
  • Interest: 2% per month on unpaid tax
  • Zero-rated supplies must still be reported

Failure to Use eTims

Electronic Invoicing

KSh 50,000

Penalty for VAT-registered businesses that fail to use the Electronic Tax Invoice Management System (eTims) for issuing invoices.

eTims Violations:
  • Issuing manual invoices: KSh 50,000
  • Failure to transmit data: KSh 100,000
  • System manipulation: KSh 500,000 + prosecution
  • Operating without registration: Business closure

Under-declaration of VAT

Tax Evasion

25% + Interest

Penalty for deliberately under-declaring VAT liability or failing to account for all taxable supplies.

Consequences:
  • Penalty: 25% of under-declared tax
  • Interest: 2% per month from due date
  • Possible criminal prosecution
  • VAT registration cancellation

Claiming False VAT Refunds

Fraudulent Claims

50% + Prosecution

Severe penalty for submitting false documents or inflated claims for VAT refunds.

Legal Consequences:
  • Penalty: 50% of false refund claimed
  • Criminal prosecution possible
  • Permanent VAT registration cancellation
  • Asset seizure and auction

Late Filing of Annual Returns

Annual Returns

25% or KSh 20,000

Penalty for filing corporation tax returns after 6 months from year-end or extended deadline.

Filing Requirements:
  • Due: 6 months after year-end
  • Extension possible with application
  • Penalty: 25% of tax or KSh 20,000 minimum
  • Interest: 2% per month on unpaid tax

Failure to Pay Advance Tax

Installment Payments

20% + Interest

Penalty for not paying quarterly advance tax installments on estimated annual liability.

Advance Tax Schedule:
  • 1st installment: By 20th April (25%)
  • 2nd installment: By 20th June (25%)
  • 3rd installment: By 20th September (25%)
  • 4th installment: By 20th December (25%)

Transfer Pricing Violations

Related Party Transactions

30% + Adjustment

Penalty for not maintaining arm's length pricing in related party transactions or failing to prepare transfer pricing documentation.

Documentation Requirements:
  • Master file for multinational groups
  • Local file for significant transactions
  • Economic analysis and benchmarking
  • Penalty: 30% of additional tax assessed

Late Remittance of WHT

Monthly Remittance

25% or KSh 10,000

Penalty for late remittance of withholding tax deducted from payments to suppliers, contractors, or service providers.

Remittance Schedule:
  • Due: 20th of following month
  • Applies to all WHT deducted
  • Penalty: 25% of tax or KSh 10,000
  • Interest: 2% per month on unpaid tax

Failure to Deduct WHT

Deduction Requirement

10% of Payment

Penalty when a withholding agent fails to deduct the required withholding tax from payments subject to WHT.

Withholding Requirements:
  • All payments above KSh 24,000 annually
  • Resident rates: 5-20%
  • Non-resident rates: 10-30%
  • Agent liable for tax + 10% penalty

Incorrect WHT Certificates

Documentation

KSh 20,000

Penalty for issuing incorrect or fraudulent withholding tax certificates to payees.

Certificate Requirements:
  • Must be issued within 30 days
  • Accurate amounts and tax rates
  • Proper payee identification
  • Signed by authorized person

Turnover Tax Violations

SME Tax

20% or KSh 5,000

Penalties for turnover tax violations including late filing, under-declaration, or exceeding turnover limits.

Common Violations:
  • Late filing: 20% of tax or KSh 5,000
  • Exceeding KSh 50M turnover: VAT registration required
  • Under-reporting turnover: 25% penalty
  • False declarations: Prosecution possible

Digital Service Tax Penalties

Technology Tax

25% + Interest

Penalties for non-compliance with Digital Service Tax on income from digital services provided in Kenya.

DST Requirements:
  • Rate: 1.5% of gross transaction value
  • Monthly filing by 20th of following month
  • Registration required for qualifying services
  • Late filing penalty: 25% of tax due

Excise Duty Violations

Specific Goods

Variable

Penalties for excise duty violations including manufacturing without license, under-declaration, or illegal importation.

Excise Penalties:
  • Manufacturing without license: KSh 500,000
  • Under-declaration: 25% of duty + goods seizure
  • Late payment: 2% per month interest
  • Smuggling: 25% of value + prosecution

Failure to Register for Tax

Registration

KSh 50,000

Penalty for conducting business that requires tax registration without obtaining the necessary PIN or tax registrations.

Registration Requirements:
  • KRA PIN for all taxpayers
  • VAT registration if turnover exceeds KSh 5M
  • PAYE for employers
  • Advance tax for certain businesses

Poor Record Keeping

Documentation

KSh 100,000

Penalty for failure to maintain proper books of accounts, records, or documents as required by tax laws.

Record Requirements:
  • Books of accounts for 5 years
  • Supporting documents and receipts
  • Bank statements and reconciliations
  • Employee records and payroll

Obstruction of KRA Officers

Non-cooperation

KSh 200,000

Penalty for obstructing, hindering, or refusing to cooperate with KRA officers during audits or investigations.

Cooperation Requirements:
  • Allow access to business premises
  • Provide requested documents
  • Answer questions truthfully
  • Assist in audit procedures

Filing False Information

Fraudulent Returns

50% + Prosecution

Severe penalty for deliberately filing false tax returns or providing fraudulent information to KRA.

Criminal Consequences:
  • Penalty: 50% of additional tax
  • Criminal prosecution possible
  • Imprisonment up to 10 years
  • Business closure in severe cases

Penalty Prevention Guide

Best practices to avoid tax penalties

Compliance Calendar

Maintain a comprehensive tax calendar with all filing and payment deadlines. Set up automatic reminders and file early to avoid last-minute issues.

Tax TypeDue DateFrequency
PAYE9th of following monthMonthly
VAT20th of following monthMonthly
WHT20th of following monthMonthly
Corporation Tax6 months after year-endAnnual

Compliance Tools

Use technology and professional services to ensure accurate and timely compliance.

Use accounting software with tax modules
Engage qualified tax professionals
Set up automated reminders
Maintain proper documentation

Pro Tip: Voluntary Disclosure

If you discover errors in past filings, consider voluntary disclosure to KRA. This can significantly reduce penalties and show good faith in correcting mistakes.

Related Resources

Additional tools and information

Need Immediate Help?

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